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22 Assembly after party
Published 6 years, 3 months ago
Description
When you get an assembly the fun doesnt stop there. You then have to fix it up and see how good it is. In this episode we discuss scaffolding, gapfilling, polishing, assembly metrics, quality control, genome structure, and visualisation tools.
Tools and papers mentioned:
https://github.com/quadram-institute-bioscience/socru
https://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0004446